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B4GALT3 beta-1,4-galactosyltransferase 3 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102448865, updated on 10-Mar-2024

Summary

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Gene symbol
B4GALT3
Gene description
beta-1,4-galactosyltransferase 3
See related
Ensembl:ENSPSIG00000005278
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See B4GALT3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005853100.1 (1438548..1452381, complement)

NW_005853100.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 21 Neighboring gene protoporphyrinogen oxidase Neighboring gene palmitoyltransferase ZDHHC3-like Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005853100 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005853100.1 Reference PelSin_1.0 Primary Assembly

    Range
    1438548..1452381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025180757.1 → XP_025036542.1  beta-1,4-galactosyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    K7FCC6
    Related
    ENSPSIP00000005686.1, ENSPSIT00000005719.1

  2. XM_025180755.1 → XP_025036540.1  beta-1,4-galactosyltransferase 3 isoform X1

    Conserved Domains (2) summary
    cd00899
    Location:123 → 342
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    cl26386
    Location:381 → 515
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

  3. XM_006115201.2 → XP_006115263.1  beta-1,4-galactosyltransferase 3 isoform X1

    See identical proteins and their annotated locations for XP_006115263.1

    Conserved Domains (2) summary
    cd00899
    Location:123 → 342
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    cl26386
    Location:381 → 515
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

  4. XM_025180756.1 → XP_025036541.1  beta-1,4-galactosyltransferase 3 isoform X1

    Conserved Domains (2) summary
    cd00899
    Location:123 → 342
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    cl26386
    Location:381 → 515
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
Nucleotide Protein
Heading Accession and Version

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