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ALG12 ALG12 alpha-1,6-mannosyltransferase [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102447329, updated on 10-Mar-2024

Summary

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Gene symbol
ALG12
Gene description
ALG12 alpha-1,6-mannosyltransferase
See related
Ensembl:ENSPSIG00000006279
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See ALG12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005854050.1 (343317..367365)

NW_005854050.1Genomic Context describing neighboring genes Neighboring gene cysteine rich with EGF like domains 2 Neighboring gene zinc finger BED-type containing 4 Neighboring gene bromodomain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005854050 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005854050.1 Reference PelSin_1.0 Primary Assembly

    Range
    343317..367365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006119597.3 → XP_006119659.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    See identical proteins and their annotated locations for XP_006119659.1

    UniProtKB/TrEMBL
    K7FFL3
    Conserved Domains (1) summary
    cl21590
    Location:19 → 354
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_025182858.1 → XP_025038643.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    K7FFL3
    Conserved Domains (1) summary
    cl21590
    Location:19 → 354
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_006119600.3 → XP_006119662.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2

    Conserved Domains (1) summary
    cl21590
    Location:107 → 289
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_006119596.3 → XP_006119658.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    See identical proteins and their annotated locations for XP_006119658.1

    UniProtKB/TrEMBL
    K7FFL3
    Related
    ENSPSIP00000006823.1, ENSPSIT00000006861.1
    Conserved Domains (1) summary
    cl21590
    Location:19 → 354
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  5. XM_006119598.3 → XP_006119660.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    See identical proteins and their annotated locations for XP_006119660.1

    UniProtKB/TrEMBL
    K7FFL3
    Conserved Domains (1) summary
    cl21590
    Location:19 → 354
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  6. XM_006119599.3 → XP_006119661.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    See identical proteins and their annotated locations for XP_006119661.1

    UniProtKB/TrEMBL
    K7FFL3
    Conserved Domains (1) summary
    cl21590
    Location:19 → 354
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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