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EEF1A1 eukaryotic translation elongation factor 1 alpha 1 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102446534, updated on 10-Mar-2024

Summary

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Gene symbol
EEF1A1
Gene description
eukaryotic translation elongation factor 1 alpha 1
See related
Ensembl:ENSPSIG00000004417
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Also known as
PsEF1a
Orthologs
human mouse all
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Genomic context

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See EEF1A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005856933.1 (471844..475996)

NW_005856933.1Genomic Context describing neighboring genes Neighboring gene CD109 molecule Neighboring gene solute carrier family 17 member 5 Neighboring gene mitochondrial tRNA translation optimization 1 Neighboring gene cyclic GMP-AMP synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005856933 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comprehensive survey of carapacial ridge-specific genes in turtle implies co-option of some regulatory genes in carapace evolution. Kuraku S, et al. Evol Dev, 2005 Jan-Feb. PMID 15642085
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation factor 1-alpha 1
Names
elongation factor-1 alpha (EF-1alpha)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001286922.1 → NP_001273851.1  elongation factor 1-alpha 1

    See identical proteins and their annotated locations for NP_001273851.1

    Status: PROVISIONAL

    Source sequence(s)
    AB124568
    UniProtKB/TrEMBL
    K7F9K8, Q5R2J1
    Related
    ENSPSIP00000004718.1, ENSPSIT00000004744.1
    Conserved Domains (1) summary
    PTZ00141
    Location:1 → 460
    PTZ00141; elongation factor 1- alpha; Provisional

RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005856933.1 Reference PelSin_1.0 Primary Assembly

    Range
    471844..475996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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