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GPD1 glycerol-3-phosphate dehydrogenase 1 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102446147, updated on 11-Apr-2024

Summary

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Gene symbol
GPD1
Gene description
glycerol-3-phosphate dehydrogenase 1
See related
Ensembl:ENSPSIG00000014596
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See GPD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005857381.1 (899547..914667)

NW_005857381.1Genomic Context describing neighboring genes Neighboring gene acid sensing ion channel subunit 1 Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit D1 Neighboring gene ceramide synthase 5 Neighboring gene uncharacterized LOC106732567

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005857381 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NADH oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerol-3-phosphate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of glycerol-3-phosphate dehydrogenase (FAD) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005857381.1 Reference PelSin_1.0 Primary Assembly

    Range
    899547..914667
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006131205.1 → XP_006131267.1  glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic

    UniProtKB/TrEMBL
    K7G7Z6
    Related
    ENSPSIP00000016407.1, ENSPSIT00000016483.1
    Conserved Domains (3) summary
    TIGR03376
    Location:1 → 304
    glycerol3P_DH; glycerol-3-phosphate dehydrogenase (NAD(+))
    pfam01210
    Location:1 → 135
    NAD_Gly3P_dh_N; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
    pfam07479
    Location:158 → 297
    NAD_Gly3P_dh_C; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
Nucleotide Protein
Heading Accession and Version

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