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HACD3 3-hydroxyacyl-CoA dehydratase 3 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102445253, updated on 10-Mar-2024

Summary

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Gene symbol
HACD3
Gene description
3-hydroxyacyl-CoA dehydratase 3
See related
Ensembl:ENSPSIG00000012431
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See HACD3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005856819.1 (1042424..1058242, complement)

NW_005856819.1Genomic Context describing neighboring genes Neighboring gene DENN domain containing 4A Neighboring gene solute carrier family 24 member 1 Neighboring gene integrator complex subunit 14 Neighboring gene dipeptidyl peptidase 8 Neighboring gene immunoglobulin superfamily DCC subclass member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005856819 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005856819.1 Reference PelSin_1.0 Primary Assembly

    Range
    1042424..1058242 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014576614.2 → XP_014432100.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 isoform X2

    UniProtKB/TrEMBL
    K7G0Y2
    Conserved Domains (2) summary
    cd06465
    Location:13 → 100
    p23_hB-ind1_like; p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins. hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) ...
    pfam04387
    Location:143 → 302
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  2. XM_006129174.3 → XP_006129236.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 isoform X1

    UniProtKB/TrEMBL
    K7G0X6, K7G0Y2
    Related
    ENSPSIP00000013936.1, ENSPSIT00000014001.1
    Conserved Domains (2) summary
    cd06465
    Location:13 → 100
    p23_hB-ind1_like; p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins. hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) ...
    pfam04387
    Location:180 → 339
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
Nucleotide Protein
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