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MTMR4 myotubularin related protein 4 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102443507, updated on 10-Mar-2024

Summary

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Gene symbol
MTMR4
Gene description
myotubularin related protein 4
See related
Ensembl:ENSPSIG00000008484
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See MTMR4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005856074.1 (353353..413535, complement)

NW_005856074.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 43 Neighboring gene uncharacterized LOC112546371 Neighboring gene uncharacterized LOC106732252 Neighboring gene caspase-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005856074 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin-related protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005856074.1 Reference PelSin_1.0 Primary Assembly

    Range
    353353..413535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006126753.3 → XP_006126815.1  myotubularin-related protein 4 isoform X4

    Conserved Domains (3) summary
    cd15733
    Location:1034 → 1093
    FYVE_MTMR4; FYVE domain found in myotubularin-related protein 4 (MTMR4) and similar proteins
    pfam06602
    Location:98 → 492
    Myotub-related; Myotubularin-like phosphatase domain
    cl17171
    Location:1 → 107
    PH-like; Pleckstrin homology-like domain

  2. XM_006126752.3 → XP_006126814.1  myotubularin-related protein 4 isoform X3

    UniProtKB/TrEMBL
    K7FMP4
    Related
    ENSPSIP00000009304.1, ENSPSIT00000009350.1
    Conserved Domains (3) summary
    cd15733
    Location:1064 → 1123
    FYVE_MTMR4; FYVE domain found in myotubularin-related protein 4 (MTMR4) and similar proteins
    pfam06602
    Location:128 → 522
    Myotub-related; Myotubularin-like phosphatase domain
    cl17171
    Location:24 → 137
    PH-like; Pleckstrin homology-like domain

  3. XM_025186452.1 → XP_025042237.1  myotubularin-related protein 4 isoform X1

    Conserved Domains (3) summary
    cd15733
    Location:1079 → 1138
    FYVE_MTMR4; FYVE domain found in myotubularin-related protein 4 (MTMR4) and similar proteins
    pfam06602
    Location:175 → 537
    Myotub-related; Myotubularin-like phosphatase domain
    cl17171
    Location:39 → 152
    PH-like; Pleckstrin homology-like domain

  4. XM_025186453.1 → XP_025042238.1  myotubularin-related protein 4 isoform X2

    Conserved Domains (3) summary
    cd15733
    Location:1079 → 1138
    FYVE_MTMR4; FYVE domain found in myotubularin-related protein 4 (MTMR4) and similar proteins
    pfam06602
    Location:175 → 537
    Myotub-related; Myotubularin-like phosphatase domain
    cl17171
    Location:39 → 152
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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