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COLEC10 collectin subfamily member 10 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102443430, updated on 10-Mar-2024

Summary

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Gene symbol
COLEC10
Gene description
collectin subfamily member 10
See related
Ensembl:ENSPSIG00000010714
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See COLEC10 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005857290.1 (430816..511713, complement)

NW_005857290.1Genomic Context describing neighboring genes Neighboring gene cellular communication network factor 3 Neighboring gene mal, T cell differentiation protein 2 Neighboring gene TNF receptor superfamily member 11b Neighboring gene uncharacterized LOC112547055

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005857290 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collectin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005857290.1 Reference PelSin_1.0 Primary Assembly

    Range
    430816..511713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006130777.2 → XP_006130839.1  collectin-10

    UniProtKB/TrEMBL
    K7FV43
    Conserved Domains (2) summary
    cd03591
    Location:157 → 272
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:47 → 83
    Collagen; Collagen triple helix repeat (20 copies)

  2. XM_025188513.1 → XP_025044298.1  collectin-10

    UniProtKB/TrEMBL
    K7FV43
    Conserved Domains (2) summary
    cd03591
    Location:157 → 272
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:47 → 83
    Collagen; Collagen triple helix repeat (20 copies)

  3. XM_025188511.1 → XP_025044296.1  collectin-10

    UniProtKB/TrEMBL
    K7FV43
    Related
    ENSPSIP00000011903.1, ENSPSIT00000011960.1
    Conserved Domains (2) summary
    cd03591
    Location:157 → 272
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:47 → 83
    Collagen; Collagen triple helix repeat (20 copies)

  4. XM_025188512.1 → XP_025044297.1  collectin-10

    UniProtKB/TrEMBL
    K7FV43
    Conserved Domains (2) summary
    cd03591
    Location:157 → 272
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:47 → 83
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

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