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ATP6V1C1 ATPase H+ transporting V1 subunit C1 [ Myotis lucifugus (little brown bat) ]

Gene ID: 102442571, updated on 30-Mar-2024

Summary

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Gene symbol
ATP6V1C1
Gene description
ATPase H+ transporting V1 subunit C1
See related
Ensembl:ENSMLUG00000003252
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See ATP6V1C1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871162.1 (3229043..3251604, complement)

NW_005871162.1Genomic Context describing neighboring genes Neighboring gene frizzled class receptor 6 Neighboring gene 40S ribosomal protein S25 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene U7 small nuclear RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871162 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit C 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871162.1 Reference Myoluc2.0

    Range
    3229043..3251604 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006093352.3 → XP_006093414.1  V-type proton ATPase subunit C 1 isoform X1

    See identical proteins and their annotated locations for XP_006093414.1

    UniProtKB/TrEMBL
    G1NZQ5
    Related
    ENSMLUP00000002957.2, ENSMLUT00000003252.2
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  2. XM_023757790.1 → XP_023613558.1  V-type proton ATPase subunit C 1 isoform X2

    Conserved Domains (2) summary
    cd14785
    Location:46 → 72
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:1 → 295
    V-ATPase_C; V-ATPase subunit C
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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