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GDNF glial cell derived neurotrophic factor [ Myotis lucifugus (little brown bat) ]

Gene ID: 102431995, updated on 30-Mar-2024

Summary

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Gene symbol
GDNF
Gene description
glial cell derived neurotrophic factor
See related
Ensembl:ENSMLUG00000005002
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See GDNF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871116.1 (2702078..2728197, complement)

NW_005871116.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 70 Neighboring gene 60S ribosomal protein L30 pseudogene Neighboring gene small nucleolar RNA U85 Neighboring gene pikachurin Neighboring gene pikachurin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871116 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glial cell-derived neurotrophic factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of neuron apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peripheral nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of branching involved in ureteric bud morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glial cell line-derived neurotrophic factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871116.1 Reference Myoluc2.0

    Range
    2702078..2728197 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023755017.1 → XP_023610785.1  glial cell line-derived neurotrophic factor isoform X1

  2. XM_014457045.2 → XP_014312531.1  glial cell line-derived neurotrophic factor isoform X3

    Conserved Domains (1) summary
    pfam00019
    Location:91 → 185
    TGF_beta; Transforming growth factor beta like domain

  3. XM_006090129.3 → XP_006090191.1  glial cell line-derived neurotrophic factor isoform X2

    UniProtKB/TrEMBL
    G1P3P9
    Related
    ENSMLUP00000004555.1, ENSMLUT00000004995.1
    Conserved Domains (1) summary
    pfam00019
    Location:116 → 210
    TGF_beta; Transforming growth factor beta like domain
Nucleotide Protein
Heading Accession and Version

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