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THBS2 thrombospondin 2 [ Myotis lucifugus (little brown bat) ]

Gene ID: 102431756, updated on 30-Mar-2024

Summary

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Gene symbol
THBS2
Gene description
thrombospondin 2
See related
Ensembl:ENSMLUG00000004647
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See THBS2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871957.1 (125545..141033, complement)

NW_005871957.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106695164

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871957 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: thrombospondin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871957.1 Reference Myoluc2.0

    Range
    125545..141033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006106789.3 → XP_006106851.1  LOW QUALITY PROTEIN: thrombospondin-2

    UniProtKB/TrEMBL
    G1P2X4
    Related
    ENSMLUP00000004233.2, ENSMLUT00000004651.2
    Conserved Domains (10) summary
    smart00209
    Location:496 → 548
    TSP1; Thrombospondin type 1 repeats
    smart00210
    Location:20 → 213
    TSPN; Thrombospondin N-terminal -like domains
    sd00001
    Location:825 → 847
    TSP3; TSP3 repeat_short [structural motif]
    sd00002
    Location:886 → 921
    TSP3; TSP3 repeat_short [structural motif]
    sd00003
    Location:693 → 728
    TSP3_1C; TSP3 repeat_1C [structural motif]
    pfam00090
    Location:384 → 429
    TSP_1; Thrombospondin type 1 domain
    pfam00093
    Location:319 → 373
    VWC; von Willebrand factor type C domain
    pfam02412
    Location:923 → 955
    TSP_3; Thrombospondin type 3 repeat
    pfam05735
    Location:975 → 1172
    TSP_C; Thrombospondin C-terminal region
    pfam12947
    Location:652 → 691
    EGF_3; EGF domain
Nucleotide Protein
Heading Accession and Version

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