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HDAC2 histone deacetylase 2 [ Myotis lucifugus (little brown bat) ]

Gene ID: 102425617, updated on 30-Mar-2024

Summary

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Gene symbol
HDAC2
Gene description
histone deacetylase 2
See related
Ensembl:ENSMLUG00000003117
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See HDAC2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871059.1 (2576718..2606156, complement)

NW_005871059.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102425395 Neighboring gene uncharacterized LOC106696272 Neighboring gene polyadenylate-binding protein 2 pseudogene Neighboring gene heparan sulfate-glucosamine 3-sulfotransferase 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871059 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871059.1 Reference Myoluc2.0

    Range
    2576718..2606156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023750142.1 → XP_023605910.1  histone deacetylase 2 isoform X2

    UniProtKB/TrEMBL
    G1Q6V0
    Conserved Domains (2) summary
    COG4547
    Location:361 → 454
    CobT2; Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphorib... [Coenzyme transport and metabolism]
    cl17011
    Location:9 → 349
    Arginase_HDAC; Arginase-like and histone-like hydrolases

  2. XM_023750141.1 → XP_023605909.1  histone deacetylase 2 isoform X1

    UniProtKB/TrEMBL
    G1Q6V0
    Related
    ENSMLUP00000002835.2, ENSMLUT00000003120.2
    Conserved Domains (2) summary
    cd10011
    Location:9 → 374
    HDAC2; Histone deacetylase 2 (HDAC2)
    COG4547
    Location:386 → 479
    CobT2; Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphorib... [Coenzyme transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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