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TARBP2 TARBP2 subunit of RISC loading complex [ Myotis lucifugus (little brown bat) ]

Gene ID: 102424011, updated on 30-Mar-2024

Summary

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Gene symbol
TARBP2
Gene description
TARBP2 subunit of RISC loading complex
See related
Ensembl:ENSMLUG00000010035
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See TARBP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871208.1 (1989467..1994932)

NW_005871208.1Genomic Context describing neighboring genes Neighboring gene poly(rC) binding protein 2 Neighboring gene mitogen-activated protein kinase kinase kinase 12 Neighboring gene neuropeptide FF-amide peptide precursor Neighboring gene activating transcription factor 7 Neighboring gene ATP synthase membrane subunit c locus 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871208 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pre-miRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables siRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of miRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of siRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of viral transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RISC-loading complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RISC-loading complex subunit TARBP2
Names
TARBP2, RISC loading complex RNA binding subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871208.1 Reference Myoluc2.0

    Range
    1989467..1994932
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006095754.3 → XP_006095816.1  RISC-loading complex subunit TARBP2 isoform X1

    See identical proteins and their annotated locations for XP_006095816.1

    UniProtKB/TrEMBL
    G1PF18
    Related
    ENSMLUP00000009139.2, ENSMLUT00000010027.2
    Conserved Domains (2) summary
    smart00358
    Location:31 → 79
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:159 → 222
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...

  2. XM_023759735.1 → XP_023615503.1  RISC-loading complex subunit TARBP2 isoform X2

    Conserved Domains (2) summary
    smart00358
    Location:10 → 58
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:138 → 201
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...

  3. XM_006095756.3 → XP_006095818.1  RISC-loading complex subunit TARBP2 isoform X3

    See identical proteins and their annotated locations for XP_006095818.1

    Conserved Domains (2) summary
    smart00358
    Location:31 → 71
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:119 → 182
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...

  4. XM_006095755.3 → XP_006095817.1  RISC-loading complex subunit TARBP2 isoform X2

    See identical proteins and their annotated locations for XP_006095817.1

    Conserved Domains (2) summary
    smart00358
    Location:10 → 58
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:138 → 201
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
Nucleotide Protein
Heading Accession and Version

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