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STAU1 staufen double-stranded RNA binding protein 1 [ Myotis lucifugus (little brown bat) ]

Gene ID: 102423413, updated on 30-Mar-2024

Summary

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Gene symbol
STAU1
Gene description
staufen double-stranded RNA binding protein 1
See related
Ensembl:ENSMLUG00000008407
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See STAU1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871263.1 (2131138..2191938)

NW_005871263.1Genomic Context describing neighboring genes Neighboring gene zinc finger NFX1-type containing 1 Neighboring gene DEAD-box helicase 27 Neighboring gene U6 spliceosomal RNA Neighboring gene chromosome segregation 1 like Neighboring gene glycoprotein IX platelet

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871263 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
double-stranded RNA-binding protein Staufen homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871263.1 Reference Myoluc2.0

    Range
    2131138..2191938
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006097988.3 → XP_006098050.1  double-stranded RNA-binding protein Staufen homolog 1 isoform X1

    UniProtKB/TrEMBL
    G1PBF6
    Conserved Domains (3) summary
    smart00358
    Location:81 → 143
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:380 → 446
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam16482
    Location:542 → 651
    Staufen_C; Staufen C-terminal domain

  2. XM_023761721.1 → XP_023617489.1  double-stranded RNA-binding protein Staufen homolog 1 isoform X2

    UniProtKB/TrEMBL
    G1PBF6
    Conserved Domains (3) summary
    smart00358
    Location:186 → 256
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:292 → 358
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam16482
    Location:454 → 563
    Staufen_C; Staufen C-terminal domain

  3. XM_023761723.1 → XP_023617491.1  double-stranded RNA-binding protein Staufen homolog 1 isoform X3

    UniProtKB/TrEMBL
    G1PBF6
    Related
    ENSMLUP00000007683.2, ENSMLUT00000008419.2
    Conserved Domains (3) summary
    smart00358
    Location:186 → 250
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:286 → 352
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam16482
    Location:448 → 557
    Staufen_C; Staufen C-terminal domain

  4. XM_006097993.3 → XP_006098055.1  double-stranded RNA-binding protein Staufen homolog 1 isoform X4

    See identical proteins and their annotated locations for XP_006098055.1

    UniProtKB/TrEMBL
    G1PBF6
    Conserved Domains (3) summary
    smart00358
    Location:105 → 175
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:211 → 277
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam16482
    Location:373 → 482
    Staufen_C; Staufen C-terminal domain

  5. XM_006097992.3 → XP_006098054.1  double-stranded RNA-binding protein Staufen homolog 1 isoform X4

    See identical proteins and their annotated locations for XP_006098054.1

    UniProtKB/TrEMBL
    G1PBF6
    Conserved Domains (3) summary
    smart00358
    Location:105 → 175
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:211 → 277
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam16482
    Location:373 → 482
    Staufen_C; Staufen C-terminal domain

  6. XM_023761724.1 → XP_023617492.1  double-stranded RNA-binding protein Staufen homolog 1 isoform X4

    UniProtKB/TrEMBL
    G1PBF6
    Conserved Domains (3) summary
    smart00358
    Location:105 → 175
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:211 → 277
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam16482
    Location:373 → 482
    Staufen_C; Staufen C-terminal domain

  7. XM_006097994.3 → XP_006098056.1  double-stranded RNA-binding protein Staufen homolog 1 isoform X4

    See identical proteins and their annotated locations for XP_006098056.1

    UniProtKB/TrEMBL
    G1PBF6
    Conserved Domains (3) summary
    smart00358
    Location:105 → 175
    DSRM; Double-stranded RNA binding motif
    cd00048
    Location:211 → 277
    DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    pfam16482
    Location:373 → 482
    Staufen_C; Staufen C-terminal domain
Nucleotide Protein
Heading Accession and Version

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