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CPTP ceramide-1-phosphate transfer protein [ Bubalus bubalis (water buffalo) ]

Gene ID: 102416595, updated on 10-Mar-2024

Summary

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Gene symbol
CPTP
Gene description
ceramide-1-phosphate transfer protein
See related
EnsemblRapid:ENSBALG00030003094
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See CPTP in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 5 NC_059161.1 (29874425..29878372)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 5 NC_058347.1 (29298337..29302284)

Chromosome 5 - NC_059161.1Genomic Context describing neighboring genes Neighboring gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 Neighboring gene pseudouridine synthase like 1 Neighboring gene integrator complex subunit 11 Neighboring gene taste 1 receptor member 3 Neighboring gene dishevelled segment polarity protein 1 Neighboring gene matrix remodeling associated 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide 1-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ceramide 1-phosphate transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermembrane lipid transfer IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide-1-phosphate transfer protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059161.1 Reference NDDB_SH_1 Primary Assembly

    Range
    29874425..29878372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025285732.3 → XP_025141517.1  ceramide-1-phosphate transfer protein isoform X2

    Related
    ENSBALP00030005649.1, ENSBALT00030008700.1
    Conserved Domains (1) summary
    pfam08718
    Location:38 → 175
    GLTP; Glycolipid transfer protein (GLTP)

  2. XM_025285731.3 → XP_025141516.1  ceramide-1-phosphate transfer protein isoform X2

    Conserved Domains (1) summary
    pfam08718
    Location:38 → 175
    GLTP; Glycolipid transfer protein (GLTP)

  3. XM_006066926.4 → XP_006066988.1  ceramide-1-phosphate transfer protein isoform X1

    See identical proteins and their annotated locations for XP_006066988.1

    Conserved Domains (1) summary
    pfam08718
    Location:30 → 177
    GLTP; Glycolipid transfer protein (GLTP)

  4. XM_006066927.4 → XP_006066989.1  ceramide-1-phosphate transfer protein isoform X1

    See identical proteins and their annotated locations for XP_006066989.1

    Conserved Domains (1) summary
    pfam08718
    Location:30 → 177
    GLTP; Glycolipid transfer protein (GLTP)
Nucleotide Protein
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