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ZBTB6 zinc finger and BTB domain containing 6 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102416507, updated on 10-Mar-2024

Summary

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Gene symbol
ZBTB6
Gene description
zinc finger and BTB domain containing 6
See related
EnsemblRapid:ENSBALG00030027471
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See ZBTB6 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 12 NC_059168.1 (93532875..93537350, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 12 NC_058354.1 (92958383..92962065, complement)

Chromosome 12 - NC_059168.1Genomic Context describing neighboring genes Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene small nucleolar RNA SNORD90 Neighboring gene uncharacterized LOC123464782 Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene RAB GTPase activating protein 1 Neighboring gene transfer RNA glycine (anticodon UCC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059168.1 Reference NDDB_SH_1 Primary Assembly

    Range
    93532875..93537350 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006049840.4 → XP_006049902.1  zinc finger and BTB domain-containing protein 6 isoform X2

    Related
    ENSBALP00030051335.1, ENSBALT00030076556.1
    Conserved Domains (5) summary
    sd00017
    Location:328 → 348
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:326 → 348
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:23 → 127
    BTB; BTB/POZ domain
    pfam13465
    Location:340 → 364
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:331 → 401
    zf-C2H2_8; C2H2-type zinc ribbon

  2. XM_025261645.3 → XP_025117430.1  zinc finger and BTB domain-containing protein 6 isoform X2

    Conserved Domains (5) summary
    sd00017
    Location:328 → 348
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:326 → 348
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:23 → 127
    BTB; BTB/POZ domain
    pfam13465
    Location:340 → 364
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:331 → 401
    zf-C2H2_8; C2H2-type zinc ribbon

  3. XM_006049839.4 → XP_006049901.1  zinc finger and BTB domain-containing protein 6 isoform X1

    Conserved Domains (5) summary
    smart00225
    Location:46 → 139
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:340 → 360
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:338 → 360
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:35 → 135
    BTB; BTB/POZ domain
    pfam13465
    Location:352 → 376
    zf-H2C2_2; Zinc-finger double domain

  4. XM_025261644.3 → XP_025117429.1  zinc finger and BTB domain-containing protein 6 isoform X2

    Related
    ENSBALP00030051375.1, ENSBALT00030076605.1
    Conserved Domains (5) summary
    sd00017
    Location:328 → 348
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:326 → 348
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:23 → 127
    BTB; BTB/POZ domain
    pfam13465
    Location:340 → 364
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:331 → 401
    zf-C2H2_8; C2H2-type zinc ribbon
Nucleotide Protein
Heading Accession and Version

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