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PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102416487, updated on 10-Mar-2024

Summary

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Gene symbol
PDHA1
Gene description
pyruvate dehydrogenase E1 subunit alpha 1
See related
EnsemblRapid:ENSBALG00030037895
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See PDHA1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) X NC_059181.1 (18142093..18162774)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) X NC_058367.1 (18843970..18864662)

Chromosome X - NC_059181.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123465398 Neighboring gene ARL14 effector protein-like Neighboring gene mitogen-activated protein kinase kinase kinase 15 Neighboring gene SH3 domain containing kinase binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyruvate dehydrogenase (acetyl-transferring) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process from pyruvate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial
Names
pyruvate dehydrogenase E1 alpha 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059181.1 Reference NDDB_SH_1 Primary Assembly

    Range
    18142093..18162774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006045837.3 → XP_006045899.1  pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

    See identical proteins and their annotated locations for XP_006045899.1

    Related
    ENSBALP00030070154.1, ENSBALT00030104873.1
    Conserved Domains (1) summary
    TIGR03182
    Location:58 → 369
    PDH_E1_alph_y; pyruvate dehydrogenase E1 component, alpha subunit
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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