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MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102415354, updated on 10-Mar-2024

Summary

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Gene symbol
MDGA1
Gene description
MAM domain containing glycosylphosphatidylinositol anchor 1
See related
EnsemblRapid:ENSBALG00030008032
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See MDGA1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
19
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 2 NC_059158.1 (40225203..40301985)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 2 NC_058344.1 (40288281..40365482)

Chromosome 2 - NC_059158.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123465043 Neighboring gene uncharacterized LOC123330016 Neighboring gene uncharacterized LOC123330013 Neighboring gene uncharacterized LOC123330022 Neighboring gene uncharacterized LOC123330023 Neighboring gene coiled-coil domain containing 167 Neighboring gene cap methyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables axon guidance receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAM domain-containing glycosylphosphatidylinositol anchor protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059158.1 Reference NDDB_SH_1 Primary Assembly

    Range
    40225203..40301985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044930533.2 → XP_044786468.2  MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X2

  2. XM_044930527.2 → XP_044786462.2  MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X1

    Related
    ENSBALP00030014907.1, ENSBALT00030022395.1

  3. XM_044930541.2 → XP_044786476.2  MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X4

    Related
    ENSBALP00030014866.1, ENSBALT00030022353.1

  4. XM_006079824.4 → XP_006079886.3  MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X3

    Related
    ENSBALP00030014875.1, ENSBALT00030022362.1

  5. XM_044930550.2 → XP_044786485.2  MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X5

RNA

  1. XR_006545713.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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