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MRC1 mannose receptor C-type 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102414758, updated on 10-Mar-2024

Summary

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Gene symbol
MRC1
Gene description
mannose receptor C-type 1
See related
EnsemblRapid:ENSBALG00030014759
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See MRC1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
31
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 14 NC_059170.1 (51488402..51600226, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 14 NC_058356.1 (50691389..50803215, complement)

Chromosome 14 - NC_059170.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123329241 Neighboring gene uncharacterized LOC123329242 Neighboring gene solute carrier family 39 member 12 Neighboring gene transmembrane protein 236 Neighboring gene signal transducing adaptor molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
macrophage mannose receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059170.1 Reference NDDB_SH_1 Primary Assembly

    Range
    51488402..51600226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025264336.3 → XP_025120121.2  macrophage mannose receptor 1 isoform X2

    Related
    ENSBALP00030027264.1, ENSBALT00030041146.1
    Conserved Domains (3) summary
    cd00037
    Location:601 → 721
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:304 → 429
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:27 → 142
    RICIN; Ricin-type beta-trefoil

  2. XM_025264335.3 → XP_025120120.2  macrophage mannose receptor 1 isoform X1

    Related
    ENSBALP00030027223.1, ENSBALT00030041081.1
    Conserved Domains (4) summary
    smart00059
    Location:161 → 209
    FN2; Fibronectin type 2 domain
    cd00037
    Location:659 → 779
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:362 → 487
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:27 → 142
    RICIN; Ricin-type beta-trefoil

  3. XM_044928088.2 → XP_044784023.1  macrophage mannose receptor 1 isoform X3

    Conserved Domains (3) summary
    smart00059
    Location:6 → 54
    FN2; Fibronectin type 2 domain
    cd00037
    Location:504 → 624
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:207 → 332
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
Nucleotide Protein
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