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LGALS12 galectin 12 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102414410, updated on 10-Mar-2024

Summary

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Gene symbol
LGALS12
Gene description
galectin 12
See related
EnsemblRapid:ENSBALG00030041351
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See LGALS12 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 5 NC_059161.1 (123236665..123246782)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 5 NC_058347.1 (121457942..121468059)

Chromosome 5 - NC_059161.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 1-like Neighboring gene phospholipase A and acyltransferase 5 Neighboring gene pregnancy-associated glycoprotein 1-like Neighboring gene phospholipase A and acyltransferase 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lactose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lymphatic endothelial cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galectin-12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059161.1 Reference NDDB_SH_1 Primary Assembly

    Range
    123236665..123246782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006050966.4 → XP_006051028.2  galectin-12 isoform X1

    Related
    ENSBALP00030076410.1, ENSBALT00030114433.1
    Conserved Domains (1) summary
    smart00908
    Location:33 → 158
    Gal-bind_lectin; Galactoside-binding lectin

  2. XM_006050967.4 → XP_006051029.2  galectin-12 isoform X2

    Related
    ENSBALP00030076408.1, ENSBALT00030114429.1
    Conserved Domains (1) summary
    smart00908
    Location:33 → 158
    Gal-bind_lectin; Galactoside-binding lectin
Nucleotide Protein
Heading Accession and Version

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