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TKFC triokinase and FMN cyclase [ Bubalus bubalis (water buffalo) ]

Gene ID: 102414214, updated on 10-Mar-2024

Summary

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Gene symbol
TKFC
Gene description
triokinase and FMN cyclase
See related
EnsemblRapid:ENSBALG00030035619
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See TKFC in Genome Data Viewer
Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 5 NC_059161.1 (121233003..121245099)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 5 NC_058347.1 (119454498..119466594)

Chromosome 5 - NC_059161.1Genomic Context describing neighboring genes Neighboring gene pepsin A Neighboring gene von Willebrand factor C and EGF domains Neighboring gene damage specific DNA binding protein 1 Neighboring gene lysosomal membrane ascorbate-dependent ferrireductase CYB561A3 Neighboring gene transmembrane protein 138

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycerone kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
triokinase/FMN cyclase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059161.1 Reference NDDB_SH_1 Primary Assembly

    Range
    121233003..121245099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006076565.3 → XP_006076627.3  triokinase/FMN cyclase isoform X1

    Related
    ENSBALP00030065619.1, ENSBALT00030098485.1

  2. XM_006076567.3 → XP_006076629.3  triokinase/FMN cyclase isoform X2

    Conserved Domains (1) summary
    cl29418
    Location:1 → 488
    Dak2; DAK2 domain

  3. XM_044943589.1 → XP_044799524.1  triokinase/FMN cyclase isoform X2

    Conserved Domains (1) summary
    cl29418
    Location:1 → 488
    Dak2; DAK2 domain

  4. XM_006076566.3 → XP_006076628.3  triokinase/FMN cyclase isoform X1

    Related
    ENSBALP00030065606.1, ENSBALT00030098465.1

  5. XM_044943588.1 → XP_044799523.1  triokinase/FMN cyclase isoform X1

  6. XM_044943590.1 → XP_044799525.1  triokinase/FMN cyclase isoform X2

    Conserved Domains (1) summary
    cl29418
    Location:1 → 488
    Dak2; DAK2 domain
Nucleotide Protein
Heading Accession and Version

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