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ISYNA1 inositol-3-phosphate synthase 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102413373, updated on 10-Mar-2024

Summary

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Gene symbol
ISYNA1
Gene description
inositol-3-phosphate synthase 1
See related
EnsemblRapid:ENSBALG00030026909
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See ISYNA1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 9 NC_059165.1 (105593466..105597692, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 9 NC_058351.1 (104225458..104229684, complement)

Chromosome 9 - NC_059165.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 25 Neighboring gene single stranded DNA binding protein 4 Neighboring gene elongation factor for RNA polymerase II Neighboring gene FKBP prolyl isomerase 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-3-phosphate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol-3-phosphate synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059165.1 Reference NDDB_SH_1 Primary Assembly

    Range
    105593466..105597692 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006057960.3 → XP_006058022.3  inositol-3-phosphate synthase 1

    Related
    ENSBALP00030050608.1, ENSBALT00030075189.1
Nucleotide Protein
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Gene LinkOut

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