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ATP5F1E ATP synthase F1 subunit epsilon [ Bubalus bubalis (water buffalo) ]

Gene ID: 102413202, updated on 18-Sep-2024

Summary

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Gene symbol
ATP5F1E
Gene description
ATP synthase F1 subunit epsilon
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Also known as
ATP5E
Orthologs
human mouse all
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Genomic context

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See ATP5F1E in Genome Data Viewer
Location:
chromosome: 14
Exon count:
3
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 14 NC_059170.1 (26250642..26254204, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 14 NC_058356.1 (25648654..25652216, complement)

Chromosome 14 - NC_059170.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123329194 Neighboring gene cathepsin Z Neighboring gene tubulin beta 1 class VI Neighboring gene PRELI domain containing 3B Neighboring gene zinc finger protein 831

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATP synthase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton motive force-driven mitochondrial ATP synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase subunit epsilon, mitochondrial
Names
ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059170.1 Reference NDDB_SH_1 Primary Assembly

    Range
    26250642..26254204 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006049053.4 → XP_006049115.1  ATP synthase subunit epsilon, mitochondrial

    See identical proteins and their annotated locations for XP_006049115.1

    Conserved Domains (1) summary
    pfam04627
    Location:3 → 50
    ATP-synt_Eps; Mitochondrial ATP synthase epsilon chain
Nucleotide Protein
Heading Accession and Version

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