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PIGB phosphatidylinositol glycan anchor biosynthesis class B [ Bubalus bubalis (water buffalo) ]

Gene ID: 102413121, updated on 10-Mar-2024

Summary

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Gene symbol
PIGB
Gene description
phosphatidylinositol glycan anchor biosynthesis class B
See related
EnsemblRapid:ENSBALG00030017466
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See PIGB in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 11 NC_059167.1 (48325314..48351535)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 11 NC_058353.1 (47908891..47935112)

Chromosome 11 - NC_059167.1Genomic Context describing neighboring genes Neighboring gene RAB27A, member RAS oncogene family Neighboring gene PIGB opposite strand 1 Neighboring gene cell cycle progression 1 Neighboring gene piercer of microtubule wall 2 Neighboring gene dynein axonemal assembly factor 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059167.1 Reference NDDB_SH_1 Primary Assembly

    Range
    48325314..48351535
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006074929.4 → XP_006074991.3  GPI mannosyltransferase 3 isoform X1

    Related
    ENSBALP00030032903.1, ENSBALT00030048929.1
    Conserved Domains (1) summary
    cl21590
    Location:53 → 522
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_025295626.3 → XP_025151411.2  GPI mannosyltransferase 3 isoform X2

    Conserved Domains (1) summary
    cl21590
    Location:53 → 507
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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