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LOC102411837 natural resistance-associated macrophage protein 2-like [ Bubalus bubalis (water buffalo) ]

Gene ID: 102411837, updated on 28-Nov-2023

Summary

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Gene symbol
LOC102411837
Gene description
natural resistance-associated macrophage protein 2-like
See related
EnsemblRapid:ENSBALG00030038293
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
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Genomic context

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See LOC102411837 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 4 NC_059160.1 (91324755..91353130, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 4 NC_058346.1 (90211563..90239938, complement)

Chromosome 4 - NC_059160.1Genomic Context describing neighboring genes Neighboring gene transmembrane serine protease 12 Neighboring gene 60S ribosomal protein L17-like Neighboring gene uncharacterized LOC123333303 Neighboring gene HIG1 domain family member 1C Neighboring gene thymosin beta-10-like Neighboring gene methyltransferase-like protein 7A Neighboring gene natural resistance-associated macrophage protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadmium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in metal ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: natural resistance-associated macrophage protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059160.1 Reference NDDB_SH_1 Primary Assembly

    Range
    91324755..91353130 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044941743.1 → XP_044797678.1  LOW QUALITY PROTEIN: natural resistance-associated macrophage protein 2-like

    Related
    ENSBALP00030072452.1, ENSBALT00030108430.1
    Conserved Domains (1) summary
    TIGR01197
    Location:61 → 458
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters
Nucleotide Protein
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