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CD247 CD247 molecule [ Bubalus bubalis (water buffalo) ]

Gene ID: 102411485, updated on 10-Mar-2024

Summary

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Gene symbol
CD247
Gene description
CD247 molecule
See related
EnsemblRapid:ENSBALG00030034001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Also known as
CD3Z
Orthologs
human mouse all
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Genomic context

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See CD247 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 6 NC_059162.1 (1349807..1432832)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 6 NC_058348.1 (1339885..1409092)

Chromosome 6 - NC_059162.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial-like Neighboring gene RCSD domain containing 1 Neighboring gene cellular repressor of E1A stimulated genes 1 Neighboring gene POU class 2 homeobox 1 Neighboring gene 60S ribosomal protein L12-like Neighboring gene uncharacterized LOC112585512

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-cell surface glycoprotein CD3 zeta chain

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001290969.1 → NP_001277898.1  T-cell surface glycoprotein CD3 zeta chain precursor

    See identical proteins and their annotated locations for NP_001277898.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ057984
    Related
    ENSBALP00030063271.1, ENSBALT00030094430.1
    Conserved Domains (3) summary
    smart00077
    Location:68 → 88
    ITAM; Immunoreceptor tyrosine-based activation motif
    pfam02189
    Location:139 → 158
    ITAM; Immunoreceptor tyrosine-based activation motif
    pfam11628
    Location:28 → 58
    TCR_zetazeta; T-cell surface glycoprotein CD3 zeta chain

RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059162.1 Reference NDDB_SH_1 Primary Assembly

    Range
    1349807..1432832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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