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CD109 CD109 molecule [ Bubalus bubalis (water buffalo) ]

Gene ID: 102410572, updated on 10-Mar-2024

Summary

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Gene symbol
CD109
Gene description
CD109 molecule
See related
EnsemblRapid:ENSBALG00030031244
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See CD109 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
34
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 10 NC_059166.1 (90818196..90955236, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 10 NC_058352.1 (89652083..89789139, complement)

Chromosome 10 - NC_059166.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123327880 Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier family 17 member 5 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC102414293 Neighboring gene uncharacterized LOC123464629

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD109 antigen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059166.1 Reference NDDB_SH_1 Primary Assembly

    Range
    90818196..90955236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025294874.3 → XP_025150659.2  CD109 antigen isoform X1

    Related
    ENSBALP00030057371.1, ENSBALT00030086239.1

  2. XM_044924508.2 → XP_044780443.2  CD109 antigen isoform X2

    Related
    ENSBALP00030057336.1, ENSBALT00030086204.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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