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LCT lactase [ Bubalus bubalis (water buffalo) ]

Gene ID: 102410227, updated on 10-Mar-2024

Summary

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Gene symbol
LCT
Gene description
lactase
See related
EnsemblRapid:ENSBALG00030000814
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See LCT in Genome Data Viewer
Location:
chromosome: 2
Exon count:
17
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 2 NC_059158.1 (113764179..113812200)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 2 NC_058344.1 (112998505..113046830)

Chromosome 2 - NC_059158.1Genomic Context describing neighboring genes Neighboring gene aspartyl-tRNA synthetase 1 Neighboring gene minichromosome maintenance complex component 6 Neighboring gene UBX domain protein 4 Neighboring gene translation machinery-associated protein 7-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactase-phlorizin hydrolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059158.1 Reference NDDB_SH_1 Primary Assembly

    Range
    113764179..113812200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025276996.3 → XP_025132781.2  lactase-phlorizin hydrolase

    Related
    ENSBALP00030001450.1, ENSBALT00030002193.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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