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ALDH6A1 aldehyde dehydrogenase 6 family member A1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102410038, updated on 10-Mar-2024

Summary

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Gene symbol
ALDH6A1
Gene description
aldehyde dehydrogenase 6 family member A1
See related
EnsemblRapid:ENSBALG00030026072
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See ALDH6A1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
13
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 11 NC_059167.1 (17855099..17875256)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 11 NC_058353.1 (17778062..17798225)

Chromosome 11 - NC_059167.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123327972 Neighboring gene visual system homeobox 2 Neighboring gene lin-52 DREAM MuvB core complex component Neighboring gene 60S ribosomal protein L36a-like Neighboring gene basal body orientation factor 1 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 5 (inactive) Neighboring gene coenzyme Q6, monooxygenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables malonate-semialdehyde dehydrogenase (acetylating) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in thymine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in valine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059167.1 Reference NDDB_SH_1 Primary Assembly

    Range
    17855099..17875256
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006053857.4 → XP_006053919.1  methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial isoform X1

    Related
    ENSBALP00030049213.1, ENSBALT00030073054.1
    Conserved Domains (1) summary
    cd07085
    Location:42 → 518
    ALDH_F6_MMSDH; Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

  2. XM_025295214.3 → XP_025150999.1  methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial isoform X2

    Related
    ENSBALP00030049112.1, ENSBALT00030072903.1
    Conserved Domains (1) summary
    cd07085
    Location:1 → 438
    ALDH_F6_MMSDH; Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2
Nucleotide Protein
Heading Accession and Version

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