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LOC102409435 ATP synthase subunit epsilon, mitochondrial [ Bubalus bubalis (water buffalo) ]

Gene ID: 102409435, updated on 18-Sep-2024

Summary

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Gene symbol
LOC102409435
Gene description
ATP synthase subunit epsilon, mitochondrial
See related
EnsemblRapid:ENSBALG00030031265
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
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Genomic context

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See LOC102409435 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
1
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 15 NC_059171.1 (37602763..37603020)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 15 NC_058357.1 (37612224..37612517)

Chromosome 15 - NC_059171.1Genomic Context describing neighboring genes Neighboring gene myelin P2 protein Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene uncharacterized LOC123329466 Neighboring gene fatty acid binding protein 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATP synthase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton motive force-driven mitochondrial ATP synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase subunit epsilon, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059171.1 Reference NDDB_SH_1 Primary Assembly

    Range
    37602763..37603020
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006068046.4 → XP_006068108.1  ATP synthase subunit epsilon, mitochondrial

    See identical proteins and their annotated locations for XP_006068108.1

    Related
    ENSBALP00030057382.1, ENSBALT00030086250.1
    Conserved Domains (1) summary
    pfam04627
    Location:3 → 50
    ATP-synt_Eps; Mitochondrial ATP synthase epsilon chain
Nucleotide Protein
Heading Accession and Version

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