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SUCLA2 succinate-CoA ligase ADP-forming subunit beta [ Bubalus bubalis (water buffalo) ]

Gene ID: 102408203, updated on 10-Mar-2024

Summary

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Gene symbol
SUCLA2
Gene description
succinate-CoA ligase ADP-forming subunit beta
See related
EnsemblRapid:ENSBALG00030014690
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See SUCLA2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 13 NC_059169.1 (71638454..71684067)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 13 NC_058355.1 (72527185..72572794)

Chromosome 13 - NC_059169.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 4 Neighboring gene nudix hydrolase 15 Neighboring gene uncharacterized LOC123328834 Neighboring gene uncharacterized LOC123328918

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate-CoA ligase (ADP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in succinyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of succinate-CoA ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
Names
succinate-CoA ligase ADP-forming beta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059169.1 Reference NDDB_SH_1 Primary Assembly

    Range
    71638454..71684067
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006060837.3 → XP_006060899.1  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial

    Related
    ENSBALP00030027071.1, ENSBALT00030040865.1
    Conserved Domains (3) summary
    PRK00696
    Location:55 → 445
    sucC; succinyl-CoA synthetase subunit beta; Provisional
    pfam00549
    Location:321 → 441
    Ligase_CoA; CoA-ligase
    pfam08442
    Location:55 → 262
    ATP-grasp_2; ATP-grasp domain
Nucleotide Protein
Heading Accession and Version

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