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GYS2 glycogen synthase 2 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102407930, updated on 18-Sep-2024

Summary

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Gene symbol
GYS2
Gene description
glycogen synthase 2
See related
EnsemblRapid:ENSBALG00030001724
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See GYS2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 4 NC_059160.1 (31209816..31268384, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 4 NC_058346.1 (31108317..31166924, complement)

Chromosome 4 - NC_059160.1Genomic Context describing neighboring genes Neighboring gene golgi transport 1B Neighboring gene spexin hormone Neighboring gene lactate dehydrogenase B Neighboring gene potassium inwardly rectifying channel subfamily J member 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen [starch] synthase, liver

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059160.1 Reference NDDB_SH_1 Primary Assembly

    Range
    31209816..31268384 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025283376.3 → XP_025139161.2  glycogen [starch] synthase, liver isoform X2

    Related
    ENSBALP00030003337.1, ENSBALT00030004911.1
    Conserved Domains (1) summary
    cl10013
    Location:26 → 582
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  2. XM_006067639.4 → XP_006067701.2  glycogen [starch] synthase, liver isoform X1

    Related
    ENSBALP00030003319.1, ENSBALT00030004879.1
    Conserved Domains (1) summary
    cd03793
    Location:26 → 614
    GT3_GSY2-like; glycogen synthase GSY2 and similar proteins

RNA

  1. XR_003108717.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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