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HK1 hexokinase 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102406489, updated on 19-Jun-2024

Summary

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Gene symbol
HK1
Gene description
hexokinase 1
See related
EnsemblRapid:ENSBALG00030005774
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Also known as
HK; hexokinase
Orthologs
human mouse all
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Genomic context

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See HK1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
19
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 4 NC_059160.1 (144835962..144906696)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 4 NC_058346.1 (143552942..143623652)

Chromosome 4 - NC_059160.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112584685 Neighboring gene Suv3 like RNA helicase Neighboring gene hexokinase domain containing 1 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene uncharacterized LOC112584687 Neighboring gene tachykinin receptor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression pattern of glucose metabolism genes correlate with development rate of buffalo oocytes and embryos in vitro under low oxygen condition. Kumar P, et al. J Assist Reprod Genet, 2015 Mar. PMID 25578537, Free PMC Article
  2. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables D-glucose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fructokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular glucose homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hexokinase-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059160.1 Reference NDDB_SH_1 Primary Assembly

    Range
    144835962..144906696
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044942200.2 → XP_044798135.1  hexokinase-1 isoform X2

    Related
    ENSBALP00030010777.1, ENSBALT00030016173.1
    Conserved Domains (2) summary
    COG5026
    Location:468 → 791
    COG5026; Hexokinase [Carbohydrate transport and metabolism]
    PTZ00107
    Location:12 → 460
    PTZ00107; hexokinase; Provisional

  2. XM_006060317.4 → XP_006060379.1  hexokinase-1 isoform X1

    Related
    ENSBALP00030010834.1, ENSBALT00030016263.1
    Conserved Domains (3) summary
    PTZ00107
    Location:12 → 460
    PTZ00107; hexokinase; Provisional
    pfam00349
    Location:469 → 667
    Hexokinase_1; Hexokinase
    pfam03727
    Location:673 → 907
    Hexokinase_2; Hexokinase
Nucleotide Protein
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