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EPHX4 epoxide hydrolase 4 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102406139, updated on 10-Mar-2024

Summary

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Gene symbol
EPHX4
Gene description
epoxide hydrolase 4
See related
EnsemblRapid:ENSBALG00030001005
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See EPHX4 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 6 NC_059162.1 (51422814..51456164, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 6 NC_058348.1 (50988998..51022349, complement)

Chromosome 6 - NC_059162.1Genomic Context describing neighboring genes Neighboring gene BTB domain containing 8 Neighboring gene lysophosphatidylcholine acyltransferase 2B Neighboring gene bromodomain testis associated Neighboring gene uncharacterized LOC123334251

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epoxide hydrolase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059162.1 Reference NDDB_SH_1 Primary Assembly

    Range
    51422814..51456164 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006054472.3 → XP_006054534.1  epoxide hydrolase 4 isoform X1

    Related
    ENSBALP00030001791.1, ENSBALT00030002704.1
    Conserved Domains (2) summary
    COG0596
    Location:76 → 350
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
    cl21494
    Location:73 → 193
    Abhydrolase; alpha/beta hydrolases

  2. XM_044944704.1 → XP_044800639.1  epoxide hydrolase 4 isoform X2

    Conserved Domains (2) summary
    COG0596
    Location:118 → 170
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
    PRK05855
    Location:30 → 170
    PRK05855; SDR family oxidoreductase
Nucleotide Protein
Heading Accession and Version

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