U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DEGS1 delta 4-desaturase, sphingolipid 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102405878, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
DEGS1
Gene description
delta 4-desaturase, sphingolipid 1
See related
EnsemblRapid:ENSBALG00030002526
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DEGS1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 5 NC_059161.1 (53965954..53976051, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 5 NC_058347.1 (52559164..52569246, complement)

Chromosome 5 - NC_059161.1Genomic Context describing neighboring genes Neighboring gene nuclear VCP like Neighboring gene small nuclear ribonucleoprotein G Neighboring gene 60S acidic ribosomal protein P1-like Neighboring gene uncharacterized LOC123465800 Neighboring gene F-box protein 28

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingolipid delta-4 desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sphingolipid delta(4)-desaturase DES1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059161.1 Reference NDDB_SH_1 Primary Assembly

    Range
    53965954..53976051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006044914.3 → XP_006044976.1  sphingolipid delta(4)-desaturase DES1

    Related
    ENSBALP00030004442.1, ENSBALT00030006941.1
    Conserved Domains (3) summary
    PLN02579
    Location:5 → 314
    PLN02579; sphingolipid delta-4 desaturase
    cd03508
    Location:26 → 315
    Delta4-sphingolipid-FADS-like; The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase ...
    pfam08557
    Location:6 → 40
    Lipid_DES; Sphingolipid Delta4-desaturase (DES)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.