U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TKTL1 transketolase like 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102404465, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TKTL1
Gene description
transketolase like 1
See related
EnsemblRapid:ENSBALG00030022891
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TKTL1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
14
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) X NC_059181.1 (104680473..104708711, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) X NC_058367.1 (145970050..145998289)

Chromosome X - NC_059181.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112582088 Neighboring gene 60S acidic ribosomal protein P1-like Neighboring gene 40S ribosomal protein S27-like Neighboring gene opsin 1, long wave sensitive Neighboring gene testis expressed 28

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transketolase-like protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059181.1 Reference NDDB_SH_1 Primary Assembly

    Range
    104680473..104708711 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044936864.2 → XP_044792799.2  transketolase-like protein 1 isoform X1

    Related
    ENSBALP00030043641.1, ENSBALT00030064403.1

  2. XM_006043643.4 → XP_006043705.2  transketolase-like protein 1 isoform X2

    Related
    ENSBALP00030043756.1, ENSBALT00030064552.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.