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CHI3L2 chitinase 3 like 2 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102404150, updated on 10-Mar-2024

Summary

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Gene symbol
CHI3L2
Gene description
chitinase 3 like 2
See related
EnsemblRapid:ENSBALG00030016095
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human all
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Genomic context

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See CHI3L2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 6 NC_059162.1 (32316355..32332370, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 6 NC_058348.1 (31925577..31941593, complement)

Chromosome 6 - NC_059162.1Genomic Context describing neighboring genes Neighboring gene chitinase acidic Neighboring gene uncharacterized LOC112585477 Neighboring gene uncharacterized LOC112585595 Neighboring gene DENN domain containing 2D Neighboring gene choline/ethanolamine phosphotransferase 1 Neighboring gene DNA damage regulated autophagy modulator 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitinase-3-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059162.1 Reference NDDB_SH_1 Primary Assembly

    Range
    32316355..32332370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044944560.2 → XP_044800495.2  chitinase-3-like protein 2 isoform X2

  2. XM_006045624.4 → XP_006045686.3  chitinase-3-like protein 2 isoform X1

    Related
    ENSBALP00030030101.1, ENSBALT00030045144.1
    Conserved Domains (1) summary
    cd02872
    Location:39 → 397
    GH18_chitolectin_chitotriosidase; This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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