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SPTLC3 serine palmitoyltransferase long chain base subunit 3 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102403397, updated on 19-Jun-2024

Summary

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Gene symbol
SPTLC3
Gene description
serine palmitoyltransferase long chain base subunit 3
See related
EnsemblRapid:ENSBALG00030013743
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See SPTLC3 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 14 NC_059170.1 (77008970..77159416, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 14 NC_058356.1 (76084583..76235054, complement)

Chromosome 14 - NC_059170.1Genomic Context describing neighboring genes Neighboring gene taspase 1 Neighboring gene isthmin 1 Neighboring gene uncharacterized LOC112578875 Neighboring gene uncharacterized LOC123329096

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of serine palmitoyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine palmitoyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059170.1 Reference NDDB_SH_1 Primary Assembly

    Range
    77008970..77159416 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006071072.4 → XP_006071134.2  serine palmitoyltransferase 3 isoform X2

    Related
    ENSBALP00030025811.1, ENSBALT00030038464.1

  2. XM_006071071.4 → XP_006071133.2  serine palmitoyltransferase 3 isoform X1

    Related
    ENSBALP00030025820.1, ENSBALT00030038480.1
Nucleotide Protein
Heading Accession and Version

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