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CTNS cystinosin, lysosomal cystine transporter [ Bubalus bubalis (water buffalo) ]

Gene ID: 102402267, updated on 10-Mar-2024

Summary

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Gene symbol
CTNS
Gene description
cystinosin, lysosomal cystine transporter
See related
EnsemblRapid:ENSBALG00030005800
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See CTNS in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 3 NC_059159.1 (38734071..38753705, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 3 NC_058345.1 (38574805..38594438, complement)

Chromosome 3 - NC_059159.1Genomic Context describing neighboring genes Neighboring gene Tax1 binding protein 3 Neighboring gene ER membrane protein complex subunit 6 Neighboring gene sedoheptulokinase Neighboring gene uncharacterized LOC123332672 Neighboring gene transient receptor potential cation channel subfamily V member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-cystine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-cystine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cystinosin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059159.1 Reference NDDB_SH_1 Primary Assembly

    Range
    38734071..38753705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025280840.2 → XP_025136625.1  cystinosin

    Related
    ENSBALP00030010890.1, ENSBALT00030016359.1
    Conserved Domains (1) summary
    TIGR00951
    Location:125 → 357
    2A43; Lysosomal Cystine Transporter

  2. XM_025280838.2 → XP_025136623.1  cystinosin

    Related
    ENSBALP00030010903.1, ENSBALT00030016382.1
    Conserved Domains (1) summary
    TIGR00951
    Location:125 → 357
    2A43; Lysosomal Cystine Transporter

  3. XM_025280839.2 → XP_025136624.1  cystinosin

    Related
    ENSBALP00030010912.1, ENSBALT00030016391.1
    Conserved Domains (1) summary
    TIGR00951
    Location:125 → 357
    2A43; Lysosomal Cystine Transporter

RNA

  1. XR_003107953.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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