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SIGLEC10 sialic acid binding Ig like lectin 10 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102401981, updated on 10-Mar-2024

Summary

Gene symbol
SIGLEC10
Gene description
sialic acid binding Ig like lectin 10
See related
EnsemblRapid:ENSBALG00030026035
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
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Genomic context

See SIGLEC10 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
15
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 18 NC_059174.1 (56924685..56939659, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 18 NC_058360.1 (57315009..57329983, complement)

Chromosome 18 - NC_059174.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102405541 Neighboring gene natural killer cell granule protein 7 Neighboring gene lens intrinsic membrane protein 2 Neighboring gene chromosome 18 C19orf84 homolog Neighboring gene uncharacterized LOC112580420 Neighboring gene myeloid cell surface antigen CD33-like Neighboring gene sialic acid-binding Ig-like lectin 13 Neighboring gene sialic acid-binding Ig-like lectin 12

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialic acid binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
sialic acid-binding Ig-like lectin 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059174.1 Reference NDDB_SH_1 Primary Assembly

    Range
    56924685..56939659 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044931418.1XP_044787353.1  sialic acid-binding Ig-like lectin 10 isoform X5

    Conserved Domains (3) summary
    smart00409
    Location:372447
    IG; Immunoglobulin
    smart00410
    Location:266345
    IG_like; Immunoglobulin like
    cd00096
    Location:277281
    Ig; Ig strand B [structural motif]
  2. XM_025270101.2XP_025125886.2  sialic acid-binding Ig-like lectin 10 isoform X5

    Conserved Domains (3) summary
    smart00409
    Location:372447
    IG; Immunoglobulin
    smart00410
    Location:266345
    IG_like; Immunoglobulin like
    cd00096
    Location:277281
    Ig; Ig strand B [structural motif]
  3. XM_044931417.1XP_044787352.1  sialic acid-binding Ig-like lectin 10 isoform X2

    Conserved Domains (3) summary
    smart00409
    Location:362437
    IG; Immunoglobulin
    smart00410
    Location:256335
    IG_like; Immunoglobulin like
    cd00096
    Location:267271
    Ig; Ig strand B [structural motif]
  4. XM_006065884.3XP_006065946.2  sialic acid-binding Ig-like lectin 10 isoform X2

    Related
    ENSBALP00030049056.1, ENSBALT00030072819.1
    Conserved Domains (3) summary
    smart00409
    Location:362437
    IG; Immunoglobulin
    smart00410
    Location:256335
    IG_like; Immunoglobulin like
    cd00096
    Location:267271
    Ig; Ig strand B [structural motif]
  5. XM_025270103.2XP_025125888.2  sialic acid-binding Ig-like lectin 10 isoform X7

    Conserved Domains (1) summary
    smart00409
    Location:268343
    IG; Immunoglobulin
  6. XM_006065890.3XP_006065952.1  sialic acid-binding Ig-like lectin 10 isoform X6

    Conserved Domains (4) summary
    smart00408
    Location:377437
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:266345
    IG_like; Immunoglobulin like
    pfam13895
    Location:265345
    Ig_2; Immunoglobulin domain
    cl11960
    Location:30147
    Ig; Immunoglobulin domain
  7. XM_006065888.3XP_006065950.2  sialic acid-binding Ig-like lectin 10 isoform X4

    Related
    ENSBALP00030049103.1, ENSBALT00030072891.1
    Conserved Domains (3) summary
    smart00409
    Location:372447
    IG; Immunoglobulin
    smart00410
    Location:266345
    IG_like; Immunoglobulin like
    cd00096
    Location:277281
    Ig; Ig strand B [structural motif]
  8. XM_006065886.3XP_006065948.2  sialic acid-binding Ig-like lectin 10 isoform X3

    Conserved Domains (3) summary
    smart00409
    Location:372447
    IG; Immunoglobulin
    smart00410
    Location:266345
    IG_like; Immunoglobulin like
    cd00096
    Location:277281
    Ig; Ig strand B [structural motif]
  9. XM_006065882.3XP_006065944.2  sialic acid-binding Ig-like lectin 10 isoform X1

    Related
    ENSBALP00030049069.1, ENSBALT00030072841.1
    Conserved Domains (3) summary
    smart00409
    Location:372447
    IG; Immunoglobulin
    smart00410
    Location:266345
    IG_like; Immunoglobulin like
    cd00096
    Location:277281
    Ig; Ig strand B [structural motif]
  10. XM_025270104.2XP_025125889.1  sialic acid-binding Ig-like lectin 10 isoform X8

    Related
    ENSBALP00030049089.1, ENSBALT00030072868.1
    Conserved Domains (3) summary
    smart00409
    Location:362437
    IG; Immunoglobulin
    smart00410
    Location:256335
    IG_like; Immunoglobulin like
    cl11960
    Location:20137
    Ig; Immunoglobulin domain