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GALNT16 polypeptide N-acetylgalactosaminyltransferase 16 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102400195, updated on 10-Mar-2024

Summary

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Gene symbol
GALNT16
Gene description
polypeptide N-acetylgalactosaminyltransferase 16
See related
EnsemblRapid:ENSBALG00030019556
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See GALNT16 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
17
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 11 NC_059167.1 (22184182..22284965, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 11 NC_058353.1 (22113342..22214096, complement)

Chromosome 11 - NC_059167.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 39 member 9 Neighboring gene ERH mRNA splicing and mitosis factor Neighboring gene exonuclease 3'-5' domain containing 2 Neighboring gene DDB1 and CUL4 associated factor 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059167.1 Reference NDDB_SH_1 Primary Assembly

    Range
    22184182..22284965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044924809.2 → XP_044780744.1  polypeptide N-acetylgalactosaminyltransferase 16

    Conserved Domains (2) summary
    cd02510
    Location:126 → 420
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:441 → 551
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_006056155.4 → XP_006056217.1  polypeptide N-acetylgalactosaminyltransferase 16

    See identical proteins and their annotated locations for XP_006056217.1

    Related
    ENSBALP00030036744.1, ENSBALT00030054671.1
    Conserved Domains (2) summary
    cd02510
    Location:126 → 420
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:441 → 551
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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