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TOR1AIP1 torsin 1A interacting protein 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102400062, updated on 10-Mar-2024

Summary

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Gene symbol
TOR1AIP1
Gene description
torsin 1A interacting protein 1
See related
EnsemblRapid:ENSBALG00030034681
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See TOR1AIP1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 5 NC_059161.1 (19853821..19901821, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 5 NC_058347.1 (19606948..19654939, complement)

Chromosome 5 - NC_059161.1Genomic Context describing neighboring genes Neighboring gene quiescin sulfhydryl oxidase 1 Neighboring gene centrosomal protein 350 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene torsin 1A interacting protein 2 Neighboring gene family with sequence similarity 163 member A Neighboring gene serine-threonine kinase receptor-associated protein-like Neighboring gene tudor domain containing 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059161.1 Reference NDDB_SH_1 Primary Assembly

    Range
    19853821..19901821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044942775.2 → XP_044798710.2  torsin-1A-interacting protein 1 isoform X4

  2. XM_025285539.3 → XP_025141324.3  torsin-1A-interacting protein 1 isoform X3

    Related
    ENSBALP00030064130.1, ENSBALT00030096063.1

  3. XM_044942778.2 → XP_044798713.2  torsin-1A-interacting protein 1 isoform X8

  4. XM_025285538.3 → XP_025141323.3  torsin-1A-interacting protein 1 isoform X1

    Related
    ENSBALP00030064113.1, ENSBALT00030096036.1

  5. XM_044942777.2 → XP_044798712.2  torsin-1A-interacting protein 1 isoform X7

    Related
    ENSBALP00030064156.1, ENSBALT00030096111.1

  6. XM_044942776.2 → XP_044798711.2  torsin-1A-interacting protein 1 isoform X5

    Related
    ENSBALP00030064136.1, ENSBALT00030096074.1

  7. XM_025285540.3 → XP_025141325.3  torsin-1A-interacting protein 1 isoform X6

  8. XM_006048655.4 → XP_006048717.4  torsin-1A-interacting protein 1 isoform X2

    Related
    ENSBALP00030064197.1, ENSBALT00030096176.1
Nucleotide Protein
Heading Accession and Version

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