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TJP2 tight junction protein 2 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102399740, updated on 10-Mar-2024

Summary

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Gene symbol
TJP2
Gene description
tight junction protein 2
See related
EnsemblRapid:ENSBALG00030006334
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See TJP2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
26
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 3 NC_059159.1 (107699280..107828151)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 3 NC_058345.1 (106550554..106679039)

Chromosome 3 - NC_059159.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102398554 Neighboring gene uncharacterized LOC123332836 Neighboring gene frataxin Neighboring gene phosphatidylethanolamine-binding protein 1 Neighboring gene endosomal transmembrane epsin interactor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059159.1 Reference NDDB_SH_1 Primary Assembly

    Range
    107699280..107828151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044939935.2 → XP_044795870.2  tight junction protein ZO-2 isoform X1

  2. XM_044939934.2 → XP_044795869.2  tight junction protein ZO-2 isoform X1

    Related
    ENSBALP00030011879.1, ENSBALT00030017768.1

  3. XM_045165058.1 → XP_045020993.1  tight junction protein ZO-2 isoform X3

    Related
    ENSBALP00030011958.1, ENSBALT00030017915.1

  4. XM_045165059.1 → XP_045020994.1  tight junction protein ZO-2 isoform X7

    Related
    ENSBALP00030011946.1, ENSBALT00030017886.1

  5. XM_044939939.2 → XP_044795874.2  tight junction protein ZO-2 isoform X9

  6. XM_044939937.2 → XP_044795872.2  tight junction protein ZO-2 isoform X6

  7. XM_044939933.2 → XP_044795868.2  tight junction protein ZO-2 isoform X4

    Related
    ENSBALP00030011856.1, ENSBALT00030017727.1

  8. XM_006050137.4 → XP_006050199.4  tight junction protein ZO-2 isoform X2

    Related
    ENSBALP00030011825.1, ENSBALT00030017674.1

  9. XM_044939936.2 → XP_044795871.2  tight junction protein ZO-2 isoform X5

  10. XM_044939938.2 → XP_044795873.2  tight junction protein ZO-2 isoform X8

Nucleotide Protein
Heading Accession and Version

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