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LARGE1 LARGE xylosyl- and glucuronyltransferase 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102398982, updated on 10-Mar-2024

Summary

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Gene symbol
LARGE1
Gene description
LARGE xylosyl- and glucuronyltransferase 1
See related
EnsemblRapid:ENSBALG00030019726
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Also known as
LARGE
Orthologs
human mouse all
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Genomic context

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See LARGE1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
19
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 4 NC_059160.1 (47747468..48370422)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 4 NC_058346.1 (46977412..47600621)

Chromosome 4 - NC_059160.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene uncharacterized LOC102398773 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene uncharacterized LOC123333228 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC123333072

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LARGE xylosyl- and glucuronyltransferase 1
Names
like-glycosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059160.1 Reference NDDB_SH_1 Primary Assembly

    Range
    47747468..48370422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044941379.2 → XP_044797314.1  LARGE xylosyl- and glucuronyltransferase 1 isoform X3

    Related
    ENSBALP00030037216.1, ENSBALT00030055313.1

  2. XM_044941380.2 → XP_044797315.1  LARGE xylosyl- and glucuronyltransferase 1 isoform X4

    Conserved Domains (1) summary
    cd06431
    Location:138 → 417
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis

  3. XM_044941376.2 → XP_044797311.1  LARGE xylosyl- and glucuronyltransferase 1 isoform X1

    Conserved Domains (2) summary
    cd06431
    Location:138 → 417
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:473 → 742
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  4. XM_006073629.4 → XP_006073691.1  LARGE xylosyl- and glucuronyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_006073691.1

    Related
    ENSBALP00030037386.1, ENSBALT00030055522.1
    Conserved Domains (2) summary
    cd06431
    Location:138 → 417
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:473 → 742
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  5. XM_044941377.2 → XP_044797312.1  LARGE xylosyl- and glucuronyltransferase 1 isoform X1

    Related
    ENSBALP00030037187.1, ENSBALT00030055273.1
    Conserved Domains (2) summary
    cd06431
    Location:138 → 417
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:473 → 742
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  6. XM_044941381.2 → XP_044797316.1  LARGE xylosyl- and glucuronyltransferase 1 isoform X5

    Conserved Domains (1) summary
    cd06431
    Location:35 → 314
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis

  7. XM_044941378.2 → XP_044797313.1  LARGE xylosyl- and glucuronyltransferase 1 isoform X2

    Related
    ENSBALP00030037068.1, ENSBALT00030055118.1
    Conserved Domains (1) summary
    cd06431
    Location:111 → 390
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
Nucleotide Protein
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