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B4GALT3 beta-1,4-galactosyltransferase 3 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102398964, updated on 10-Mar-2024

Summary

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Gene symbol
B4GALT3
Gene description
beta-1,4-galactosyltransferase 3
See related
EnsemblRapid:ENSBALG00030033296
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See B4GALT3 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 6 NC_059162.1 (8426599..8432479)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 6 NC_058348.1 (8250634..8256515)

Chromosome 6 - NC_059162.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 4 Neighboring gene uncharacterized LOC123465869 Neighboring gene protoporphyrinogen oxidase Neighboring gene ubiquitin specific peptidase 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059162.1 Reference NDDB_SH_1 Primary Assembly

    Range
    8426599..8432479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044944125.2 → XP_044800060.1  beta-1,4-galactosyltransferase 3

    Conserved Domains (1) summary
    cd00899
    Location:125 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_044944124.2 → XP_044800059.1  beta-1,4-galactosyltransferase 3

    Conserved Domains (1) summary
    cd00899
    Location:125 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  3. XM_006048476.4 → XP_006048538.1  beta-1,4-galactosyltransferase 3

    See identical proteins and their annotated locations for XP_006048538.1

    Related
    ENSBALP00030061546.1, ENSBALT00030092179.1
    Conserved Domains (1) summary
    cd00899
    Location:125 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  4. XM_044944126.2 → XP_044800061.1  beta-1,4-galactosyltransferase 3

    Conserved Domains (1) summary
    cd00899
    Location:125 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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