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B3GALT2 beta-1,3-galactosyltransferase 2 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102397210, updated on 10-Mar-2024

Summary

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Gene symbol
B3GALT2
Gene description
beta-1,3-galactosyltransferase 2
See related
EnsemblRapid:ENSBALG00030000174
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See B3GALT2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 5 NC_059161.1 (69208096..69215729, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 5 NC_058347.1 (67723838..67731472, complement)

Chromosome 5 - NC_059161.1Genomic Context describing neighboring genes Neighboring gene ubiquitin C-terminal hydrolase L5 Neighboring gene Ro60, Y RNA binding protein Neighboring gene glutaredoxin 2 Neighboring gene cell division cycle 73 Neighboring gene nucleosome assembly protein 1-like 1 Neighboring gene calponin-2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059161.1 Reference NDDB_SH_1 Primary Assembly

    Range
    69208096..69215729 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006061421.4 → XP_006061483.1  beta-1,3-galactosyltransferase 2

    Related
    ENSBALP00030000244.1, ENSBALT00030000398.1
    Conserved Domains (1) summary
    pfam01762
    Location:165 → 359
    Galactosyl_T; Galactosyltransferase

  2. XM_025286107.3 → XP_025141892.1  beta-1,3-galactosyltransferase 2

    Conserved Domains (1) summary
    pfam01762
    Location:165 → 359
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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