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SLC27A5 solute carrier family 27 member 5 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102396712, updated on 11-Apr-2024

Summary

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Gene symbol
SLC27A5
Gene description
solute carrier family 27 member 5
See related
EnsemblRapid:ENSBALG00030011879
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See SLC27A5 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
10
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 18 NC_059174.1 (65700070..65709729, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 18 NC_058360.1 (66079055..66088713, complement)

Chromosome 18 - NC_059174.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 324A Neighboring gene zinc finger protein 446 Neighboring gene zinc finger and BTB domain containing 45 Neighboring gene uncharacterized LOC123330338

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ketone body biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride mobilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bile acyl-CoA synthetase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059174.1 Reference NDDB_SH_1 Primary Assembly

    Range
    65700070..65709729 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006067280.4 → XP_006067342.1  bile acyl-CoA synthetase

    Related
    ENSBALP00030022489.1, ENSBALT00030033153.1
    Conserved Domains (2) summary
    PRK08279
    Location:87 → 690
    PRK08279; long-chain-acyl-CoA synthetase; Validated
    cl17068
    Location:140 → 680
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein
Heading Accession and Version

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