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HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102395741, updated on 10-Mar-2024

Summary

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Gene symbol
HSD17B12
Gene description
hydroxysteroid 17-beta dehydrogenase 12
See related
EnsemblRapid:ENSBALG00030036748
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See HSD17B12 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 16 NC_059172.1 (10906918..11077543, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 16 NC_058358.1 (10613617..10784578, complement)

Chromosome 16 - NC_059172.1Genomic Context describing neighboring genes Neighboring gene chromosome 16 C11orf96 homolog Neighboring gene alkB homolog 3, alpha-ketoglutarate dependent dioxygenase Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene uncharacterized LOC112579560 Neighboring gene uncharacterized LOC123329711 Neighboring gene uncharacterized LOC112579559

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain 3-oxoacyl-CoA reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059172.1 Reference NDDB_SH_1 Primary Assembly

    Range
    10906918..11077543 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025266199.2 → XP_025121984.2  very-long-chain 3-oxoacyl-CoA reductase

    Related
    ENSBALP00030067866.1, ENSBALT00030101764.1
Nucleotide Protein
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