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SOAT2 sterol O-acyltransferase 2 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102395575, updated on 10-Mar-2024

Summary

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Gene symbol
SOAT2
Gene description
sterol O-acyltransferase 2
See related
EnsemblRapid:ENSBALG00030036855
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See SOAT2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 4 NC_059160.1 (93400498..93410980)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 4 NC_058346.1 (92182993..92193475)

Chromosome 4 - NC_059160.1Genomic Context describing neighboring genes Neighboring gene SPRY domain containing 3 Neighboring gene insulin like growth factor binding protein 6 Neighboring gene uncharacterized LOC112584608 Neighboring gene cysteine sulfinic acid decarboxylase Neighboring gene zinc finger protein 740 Neighboring gene integrin subunit beta 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol efflux IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol O-acyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059160.1 Reference NDDB_SH_1 Primary Assembly

    Range
    93400498..93410980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006046613.4 → XP_006046675.2  sterol O-acyltransferase 2 isoform X2

    Conserved Domains (1) summary
    pfam03062
    Location:162 → 507
    MBOAT; membrane-bound O-acyltransferase family

  2. XM_006046612.4 → XP_006046674.2  sterol O-acyltransferase 2 isoform X1

    Related
    ENSBALP00030068098.1, ENSBALT00030102108.1
    Conserved Domains (1) summary
    pfam03062
    Location:166 → 511
    MBOAT; membrane-bound O-acyltransferase family
Nucleotide Protein
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