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TMED6 transmembrane p24 trafficking protein 6 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102395475, updated on 10-Mar-2024

Summary

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Gene symbol
TMED6
Gene description
transmembrane p24 trafficking protein 6
See related
EnsemblRapid:ENSBALG00030039629
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See TMED6 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
5
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 18 NC_059174.1 (36067495..36073637, complement)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 18 NC_058360.1 (36060373..36066515, complement)

Chromosome 18 - NC_059174.1Genomic Context describing neighboring genes Neighboring gene syntrophin beta 2 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene vacuolar protein sorting 4 homolog A Neighboring gene component of oligomeric golgi complex 8 Neighboring gene nucleolar pre-rRNA processing protein NIP7 Neighboring gene telomeric repeat binding factor 2 Neighboring gene cytochrome b5 type B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059174.1 Reference NDDB_SH_1 Primary Assembly

    Range
    36067495..36073637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025268949.2 → XP_025124734.1  transmembrane emp24 domain-containing protein 6 isoform X1

    Related
    ENSBALP00030073197.1, ENSBALT00030109565.1
    Conserved Domains (1) summary
    pfam01105
    Location:50 → 235
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  2. XM_006047621.3 → XP_006047683.1  transmembrane emp24 domain-containing protein 6 isoform X2

    Related
    ENSBALP00030073206.1, ENSBALT00030109580.1
    Conserved Domains (1) summary
    pfam01105
    Location:43 → 228
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

RNA

  1. XR_006546367.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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