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PGM2L1 phosphoglucomutase 2 like 1 [ Bubalus bubalis (water buffalo) ]

Gene ID: 102394216, updated on 10-Mar-2024

Summary

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Gene symbol
PGM2L1
Gene description
phosphoglucomutase 2 like 1
See related
EnsemblRapid:ENSBALG00030022073
Gene type
protein coding
RefSeq status
MODEL
Organism
Bubalus bubalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus
Orthologs
human mouse all
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Genomic context

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See PGM2L1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
14
Annotation release Status Assembly Chr Location
103 current NDDB_SH_1 (GCF_019923935.1) 16 NC_059172.1 (31094004..31154860)
102 previous assembly NDDB_DH_1 (GCF_019923925.1) 16 NC_058358.1 (30757692..30818536)

Chromosome 16 - NC_059172.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112579644 Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 3 Neighboring gene uncharacterized LOC123329748 Neighboring gene prolyl 4-hydroxylase subunit alpha 3 Neighboring gene 60S ribosomal protein L21-like Neighboring gene protein phosphatase methylesterase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De Novo Transcriptome Assembly of the Chinese Swamp Buffalo by RNA Sequencing and SSR Marker Discovery. Deng T, et al. PLoS One, 2016. PMID 26766209, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucose-1,6-bisphosphate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables intramolecular phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucose 1,6-bisphosphate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bubalus bubalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NDDB_SH_1 Primary Assembly

Genomic

  1. NC_059172.1 Reference NDDB_SH_1 Primary Assembly

    Range
    31094004..31154860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006073303.4 → XP_006073365.2  glucose 1,6-bisphosphate synthase

    Related
    ENSBALP00030042039.1, ENSBALT00030062175.1
Nucleotide Protein
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Gene LinkOut

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